How to Create a Passkey in Microsoft Authenticator

By Nick Hanson | August 8, 2025

Cyber threats are constantly evolving and becoming more sophisticated. This can lead not only to an increased number of cyber threats, but also to a complicated number of security hoops for your team to jump through.

Fortunately, creating passkeys in Microsoft Authenticator is a straightforward and secure alternative. This replaced traditional passwords with assigned credentials that offer a quick and seamless sign-in experience that is user-friendly and highly resistant to phishing and other cyber attacks.

In this blog, we will show you how to create passkeys in Microsoft Authenticator so you and your team can elevate your security strategy without the headache of password overload.

What are Passkeys in Microsoft Authenticator?

A Passkey is a modern, more secure way to sign in to applications and websites without the need to remember a password. Passkeys use cryptographic keys that are tied to your device to provide authentication. The digital credential is stored securely on your device and uses public-key cryptography to authenticate you. This method is resistant to phishing, password leaks, and brute-force attacks.

Why should I configure Microsoft Authenticator Passkeys?

By adopting Passkeys via the Microsoft Authenticator application, you can:

  • Reduce the financial and technical burden of password management
  • Provide your users will have a more streamlined sign-in process
  • Increase your security against password-based attacks
  • Securely store the protected passkey by biometrics or PIN
  • Improve your security posture with no additional hardware cost

How You Can Create a Passkey

Once you have Passkey registration configured in your tenant users will be able to follow these steps:

1. Go to My Account and under Security info click on “UPDATE INFO”

Create a passkey Microsoft Authenticator

2. Click on “Add sign-in method”

Add sign in method to Microsoft Authenticator

3. Select “Passkey in Microsoft Authenticator”

Passkey in Microsoft authenticator

4. Note you need to have the authenticator app and at least Android 14 or iOS 17

Create a passkey Microsoft Authenticator Next

You can't create passkeys unless you have these systems. Click “Next” if your device meets this criterion

5. Open your authenticator app and follow the instructions before clicking “Next”

Steps to setting up microsoft authenticator passkey

6. From your authenticator app you will see these options:

When you click on your account, click “Create a passkey”.

passkey sign in verify

7. Click “Sign In” to create your passkey

This will require your password and MFA.

Sign in to create passkey

8. Note your password autofill will have to be turned on for the authenticator app

Passkey created

This means if you already have an autofill you will have to select the correct application to use when prompted for credentials.

9. On your next sign in you will pick your account or fill in your account

Pick an account

10. Instead of entering your password, select “Use your face, fingerprint, PIN, or security key instead”

Use your face fingerprint, pin or security key instead

11. Sign in with your passkey by choosing “iPhone, iPad, or Android device”

sign in with your passkey

Then, click “Next” (Note the experience will only be steps 11 and 12 after your first sign in).

12. You will need your Bluetooth turned on for both devices

Then, use your camera to scan the QR code. The passkey will be confirmed, and you will be signed in.

Sign in with Microsoft Authenticator password on apple or android

Benefits of Microsoft Authenticator Passkeys

  1. User Experience – No longer need to enter password, just open camera app.
  2. Bluetooth forces proximity to device
  3. Private key only on the mobile device provides phishing resistance
  4. Enumerates details of the passkey request (see step 12 screenshot)
  5. Biometric Integration

Drawbacks:

While passkeys are high effective, there are a few things you should keep in mind before creating them for your environment:

  1. You will have to have Bluetooth enabled
  2. You will have to select the correct credential manager if you have more than one
  3. Some processes don’t support Passkeys

Always test new configurations before making permanent changes. For example, passkeys can be configured to be an option for users without removing your current process while testing impact.

How the Stoneridge Team Can Help

Every tenant and user base are different. The Stoneridge team can help:

  • Configure a custom passkey adoption strategy
  • Implement authentication method requirements
  • Build conditional access policies to enhance security across your organization

Our team is happy to answer questions, talk through your goals, and guide you through the next steps, at your pace.

Reach out to us to start the conversation.

Nick Hanson
Our Verified Expert
Nick Hanson
Read More from Nick Hanson

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